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## S

StartGA - class ee.ut.ga.tools.StartGA.
  Genetic Algorithm for the Discovery of DNA Regulatory Elements.
StartGA() - Constructor for class ee.ut.ga.tools.StartGA
setDataBad(int) - Method in class ee.ut.ga.model.PWM
setDataBadAll(int) - Method in class ee.ut.ga.model.PWM
setDataGood(int) - Method in class ee.ut.ga.model.PWM
setDataGoodAll(int) - Method in class ee.ut.ga.model.PWM
setDataRow(int) - Method in class ee.ut.ga.model.Weight
setDataRowPosition(int) - Method in class ee.ut.ga.model.Weight
setFitness(BigDecimal) - Method in class ee.ut.ga.model.PWM
setFitnessValue(Map, PWM, int, String) - Static method in class ee.ut.ga.business.FitnessFunction
  Counts fitness value of specified `PWM` in given data.
setPwmProps(String) - Method in class ee.ut.ga.model.PWM
  Reads and writes properties into object.
setWeight(double) - Method in class ee.ut.ga.model.Weight
setWeightThreshold(double) - Method in class ee.ut.ga.model.PWM
setX(BigDecimal) - Method in class ee.ut.ga.model.Coordinate
setX(double) - Method in class ee.ut.ga.model.Coordinate
setY(BigDecimal) - Method in class ee.ut.ga.model.Coordinate
setY(double) - Method in class ee.ut.ga.model.Coordinate

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