A B C D E F G H I L M N P R S T W X Y

P

PAM_RESULT - Static variable in class ee.ut.ga.util.PropertyUtil

PAM_TO_ANALIZE - Static variable in class ee.ut.ga.util.PropertyUtil

POPULATION_SIZE - Static variable in class ee.ut.ga.business.GeneticAlgorithm

POPULATION_SIZE - Static variable in class ee.ut.ga.util.PropertyUtil

PWM - class ee.ut.ga.model.PWM.

Position-WeightMatrix object.

PWM(Map, Map) - Constructor for class ee.ut.ga.model.PWM

PWM_MIN_LENGTH - Static variable in class ee.ut.ga.business.GeneticAlgorithm

PWM_MIN_LENGTH - Static variable in class ee.ut.ga.util.PropertyUtil

PropertyUtil - class ee.ut.ga.util.PropertyUtil.

PropertyUtil() - Constructor for class ee.ut.ga.util.PropertyUtil

PwmUtil - class ee.ut.ga.util.PwmUtil.

PwmUtil() - Constructor for class ee.ut.ga.util.PwmUtil

pValue(int, int, int, int) - Static method in class ee.ut.ga.business.FitnessFunction

Calculates pValue.

pValue(BigDecimal, BigDecimal, BigDecimal, BigDecimal) - Static method in class ee.ut.ga.util.MathUtil

Computes p-value (calculation of p-value is reversed)

pValueIsPoositiveTrue(int, int, int, int, BigDecimal) - Static method in class ee.ut.ga.business.FitnessFunction

pam - Variable in class ee.ut.ga.model.PWM

pattern - Variable in class ee.ut.ga.model.PWM

population - Variable in class ee.ut.ga.business.GeneticAlgorithm

priors - Variable in class ee.ut.ga.business.GeneticAlgorithm

pwm - Variable in class ee.ut.ga.model.PWM