CIPHR - ERA Chair for Computational Imaging and Processing in High Resolution

Permanent URI for this collectionhttps://hdl.handle.net/10062/91302

In the project, the Centre of Photonics and Computational Imaging is established at the UT. The combined application of photonics and computationally intensive data processing allows to enhance the image quality, resolution or add spatial dimension to the image beyond the physical or technical limits of the imaging system. By nature, the research is interdisciplinary and embraces the extensive competence of the University of Tartu in optics, spectroscopy, mathematics, computer science and their applications.

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3D incoherent imaging using an ensemble of sparse self-rotating beams
(Optics Express, 2023) Bleahu, Andrei-ioan; Gopinath, Shivasubramanian; Kahro, Tauno; Angamuthu, Praveen Periyasamy; Rajeswary, Aravind Simon John Francis; Prabhakar, Shashi; Kumar, Ravi; Salla, Gangi Reddy; Singh, Ravindra P.; Kukli, Kaupo; Tamm, Aile; Rosen, Joseph; Anand, Vijayakumar
Interferenceless coded aperture correlation holography (I-COACH) is one of the simplest incoherent holography techniques. In I-COACH, the light from an object is modulated by a coded mask, and the resulting intensity distribution is recorded. The 3D image of the object is reconstructed by processing the object intensity distribution with the pre-recorded 3D point spread intensity distributions. The first version of I-COACH was implemented using a scattering phase mask, which makes its implementation challenging in light-sensitive experiments. The I-COACH technique gradually evolved with the advancement in the engineering of coded phase masks that retain randomness but improve the concentration of light in smaller areas in the image sensor. In this direction, I-COACH was demonstrated using weakly scattered intensity patterns, dot patterns and recently using accelerating Airy patterns, and the case with accelerating Airy patterns exhibited the highest SNR. In this study, we propose and demonstrate I-COACH with an ensemble of self-rotating beams. Unlike accelerating Airy beams, self-rotating beams exhibit a better energy concentration. In the case of self-rotating beams, the uniqueness of the intensity distributions with depth is attributed to the rotation of the intensity pattern as opposed to the shifts of the Airy patterns, making the intensity distribution stable along depths. A significant improvement in SNR was observed in optical experiments.
3D single shot lensless incoherent optical imaging using coded phase aperture system with point response of scattered airy beams
(Scientific Reports, 2023) Kumar, Ravi; Anand, Vijayakumar; Rosen, Joseph
Interferenceless coded aperture correlation holography (I-COACH) techniques have revolutionized the field of incoherent imaging, offering multidimensional imaging capabilities with a high temporal resolution in a simple optical configuration and at a low cost. The I-COACH method uses phase modulators (PMs) between the object and the image sensor, which encode the 3D location information of a point into a unique spatial intensity distribution. The system usually requires a one-time calibration procedure in which the point spread functions (PSFs) at different depths and/or wavelengths are recorded. When an object is recorded under identical conditions as the PSF, the multidimensional image of the object is reconstructed by processing the object intensity with the PSFs. In the previous versions of I-COACH, the PM mapped every object point to a scattered intensity distribution or random dot array pattern. The scattered intensity distribution results in a low SNR compared to a direct imaging system due to optical power dilution. Due to the limited focal depth, the dot pattern reduces the imaging resolution beyond the depth of focus if further multiplexing of phase masks is not performed. In this study, I-COACH has been realized using a PM that maps every object point into a sparse random array of Airy beams. Airy beams during propagation exhibit a relatively high focal depth with sharp intensity maxima that shift laterally following a curved path in 3D space. Therefore, sparse, randomly distributed diverse Airy beams exhibit random shifts with respect to one another during propagation, generating unique intensity distributions at different distances while retaining optical power concentrations in small areas on the detector. The phase-only mask displayed on the modulator was designed by random phase multiplexing of Airy beam generators. The simulation and experimental results obtained for the proposed method are significantly better in SNR than in the previous versions of I-COACH.
4D imaging using accelerating airy beams and nonlinear reconstruction
(2023) Bleahu, Andrei; Gopinath, Shivasubramanian; Anand, Vijayakumar; Rosen, Joseph; Juodkazis, Saulius; Tamm, Aile; Kukli, Kaupo; Rajeswary, Aravind Simon John Francis; Katkus, Tomas; Pristy, Agnes; Ng, Soon Hock; Praveen, P. A.; Kahro, Tauno; Smith, Daniel; Arokiaraj, Francis Gracy; Kumar, Ravi
Anisotropic 3D columnar micro-film coating for applications in infrared and visible spectral ranges
(Elsevier B.V., 2022) Hu, J.; Han, M.; Grineviciute, L.; Ng, S.H.; Anand, V.; Katkus, T.; Ryu, M.; Morikawa, J.; Tobin, M.J.; Vongsvivut, J.; Tolenis, T.
Polarisation analysis of thin (∼1 μm) SiO2 films deposited via evaporation at a glancing angle of 70◦ to the normal on resist pillar arrays was carried out using synchrotron-based Fourier transform infrared (s-FTIR) microspectroscopy in reflection mode. Changes in intensity of absorption bands were observed to follow the angular dependence of ∼ cos2 𝜃, consistent with the absorption anisotropy. The strongest absorption was found to be the sharp Si–O–Si stretching vibrational mode at 1040 ± 20 cm−1, which can be used for sensor applications, as well as radiative cooling in the atmospheric transparency window, within the range of 8-13 μm (i.e. 1250-769 cm−1). Anisotropy of IR absorbance is correlated with retardance/birefringence of the same patterns in the visible spectral range. Larger period patterns of 3D columnar SiO2 films of ∼1 μm in thickness deposited on polymer/resist pillar arrays provide the possibility to control anisotropy of the form-birefringent 3D columnar films.
Coded Aperture-Based Self-wavefront Interference Using Transverse Splitting Holography
(2023 International Conference on Next Generation Electronics (NEleX), 2023) Joshi, Narmada; Xavier, Agnes Pristy Ignatius; Arockiaraj, Francis Gracy; Rajeswary, Aravind Simon John Francis; Juodkazis, Saulius; Rosen, Joseph; Tamm, Aile; Anand, Vijayakumar
Self-wavefront interference transverse splitting holography (SWITSH) is a recently developed holographic technique to solve a fundamental problem in the manufacturing of large-area diffractive lenses. In SWITSH, a low NA diffractive lens modulates the light from an object, and the modulated light is interfered with light from the same object that reaches beyond the aperture of the diffractive lens. The resulting self-interference hologram is processed with the pre-recorded point spread hologram using the Lucy-Richardson-Rosen algorithm. Since the self-interference hologram is formed by collecting light beyond the NA of the diffractive lens, it acquires the object information corresponding to the higher spatial frequencies of the object. Consequently, a higher imaging resolution is obtained in SWITSH compared to that of direct imaging with a diffractive lens. In the proof-of-concept study, a resolution improvement of an order was demonstrated. However, the optical architecture of the first version of SWITSH was not optimal, as the strength of the self-interference signal was weak. In this study, we improve SWITSH using different coded apertures, such as axicon and spiral element. An improvement in the strength of the self-interference signal was noticed with the axicon and spiral element. Simulation and experimental results using a diffractive lens, axicon and spiral element are presented.
Computational Imaging at the Infrared Beamline of the Australian Synchrotron Using the Lucy–Richardson–Rosen Algorithm
(2023) Ng, Soon Hock; Anand, Vijayakumar; Han, Molong; Smith, Daniel; Maksimovic, Jovan; Katkus, Tomas; Klein, Annaleise; Bambery, Keith; Tobin, Mark J.; Vongsvivut, Jitraporn; Juodkazis, Saulius
The Fourier transform infrared microspectroscopy (FTIRm) system of the Australian Synchrotron has a unique optical configuration with a peculiar beam profile consisting of two parallel lines. The beam is tightly focused using a 36× Schwarzschild objective to a point on the sample and the sample is scanned pixel by pixel to record an image of a single plane using a single pixel mercury cadmium telluride detector. A computational stitching procedure is used to obtain a 2D image of the sample. However, if the imaging condition is not satisfied, then the recorded object’s information is distorted. Unlike commonly observed blurring, the case with a Schwarzschild objective is unique, with a donut like intensity distribution with three distinct lobes. Consequently, commonly used deblurring methods are not efficient for image reconstruction. In this study, we have applied a recently developed computational reconstruction method called the Lucy–Richardson–Rosen algorithm (LRRA) in the online FTIRm system for the first time. The method involves two steps: training step and imaging step. In the training step, the point spread function (PSF) library is recorded by temporal summation of intensity patterns obtained by scanning the pinhole in the x-y directions across the path of the beam using the single pixel detector along the z direction. In the imaging step, the process is repeated for a complicated object along only a single plane. This new technique is named coded aperture scanning holography. Different types of samples, such as two pinholes; a number 3 USAF object; a cross shaped object on a barium fluoride substrate; and a silk sample are used for the demonstration of both image recovery and 3D imaging applications.
Computational Imaging Using Deterministic Optical Fields and Non-linear Reconstruction
(Imaging and Applied Optics Congress 2022 (3D, AOA, COSI, ISA, pcAOP), 2022) Arockiaraj, Francis Gracy; Selva, Shakina Jothi; Inbanathan, Stephen Rajkumar; Kamalam, Manueldoss Beaula Ruby; Rajeswary, Aravind Simon John Francis; Anand, Vijayakumar; Rosen, Joseph
Computational imaging techniques are indirect ones consisting of two steps: optical recording and computational reconstruction. In this study, deterministic optical fields such as Bessel, Airy, Gaussian and Laguerre-Gaussian were studied in this indirect imaging framework.
Computational three-dimensional imaging with near infrared synchrotron beam using Fresnel zone apertures fabricated on barium fluoride windows using femtosecond laser ablation
(2023) Smith, Daniel; Han, Molong; Ng, Soon Hock; Katkus, Tomas; Rajeswary, Aravind Simon John Francis; Tobin, Mark J.; Vongsvivut, Jitraporn; Juodkazis, Saulius; Anand, Vijayakumar
Deep Deconvolution of Object Information Modulated by a Refractive Lens Using Lucy-Richardson-Rosen Algorithm
(2022) Praveen, P.A.; Arockiaraj, Francis Gracy; Gopinath, Shivasubramanian; Smith, Daniel; Kahro, Tauno; Valdma, Sandhra-Mirella; Bleahu, Andrei; Ng, Soon Hock; Reddy, Andra Naresh Kumar; Katkus, Tomas; Rajeswary, Aravind Simon John Francis; Ganeev, Rashid A.; Pikker, Siim; Kukli, Kaupo; Tamm, Aile; Juodkazis, Saulius; Anand, Vijayakumar
A refractive lens is one of the simplest, most cost-effective and easily available imaging elements. Given a spatially incoherent illumination, a refractive lens can faithfully map every object point to an image point in the sensor plane, when the object and image distances satisfy the imaging conditions. However, static imaging is limited to the depth of focus, beyond which the point-to-point mapping can only be obtained by changing either the location of the lens, object or the imaging sensor. In this study, the depth of focus of a refractive lens in static mode has been expanded using a recently developed computational reconstruction method, Lucy-Richardson-Rosen algorithm (LRRA). The imaging process consists of three steps. In the first step, point spread functions (PSFs) were recorded along different depths and stored in the computer as PSF library. In the next step, the object intensity distribution was recorded. The LRRA was then applied to deconvolve the object information from the recorded intensity distributions during the final step. The results of LRRA were compared with two well-known reconstruction methods, namely the Lucy-Richardson algorithm and non-linear reconstruction.
Engineering axial resolution realtime and postrecording of incoherent holograms using hybridization techniques
(2024) Gopinath, Shivasubramanian; Rajeswary, Aravind Simon John Francis; Anand, Vijayakumar
Enhanced design of multiplexed coded masks for Fresnel incoherent correlation holography
(Scientific Reports, 2023) Gopinath, Shivasubramanian; Bleahu, Andrei; Kahro, Tauno; Rajeswary, Aravind Simon John Francis; Kumar, Ravi; Kukli, Kaupo; Tamm, Aile; Rosen, Joseph; Anand, Vijayakumar
Fresnel incoherent correlation holography (FINCH) is a well-established incoherent digital holography technique. In FINCH, light from an object point splits into two, differently modulated using two diffractive lenses with different focal distances and interfered to form a self-interference hologram. The hologram numerically back propagates to reconstruct the image of the object at different depths. FINCH, in the inline configuration, requires at least three camera shots with different phase shifts between the two interfering beams followed by superposition to obtain a complex hologram that can be used to reconstruct an object’s image without the twin image and bias terms. In general, FINCH is implemented using an active device, such as a spatial light modulator, to display the diffractive lenses. The first version of FINCH used a phase mask generated by random multiplexing of two diffractive lenses, which resulted in high reconstruction noise. Therefore, a polarization multiplexing method was later developed to suppress the reconstruction noise at the expense of some power loss. In this study, a novel computational algorithm based on the Gerchberg-Saxton algorithm (GSA) called transport of amplitude into phase (TAP-GSA) was developed for FINCH to design multiplexed phase masks with high light throughput and low reconstruction noise. The simulation and optical experiments demonstrate a power efficiency improvement of ~ 150 and ~ 200% in the new method in comparison to random multiplexing and polarization multiplexing, respectively. The SNR of the proposed method is better than that of random multiplexing in all tested cases but lower than that of the polarization multiplexing method.
Enhanced design of pure phase greyscale diffractive optical elements by phase-retrieval-assisted multiplexing of complex functions
(2023) Gopinath, Shivasubramanian; Bleahu, Andrei; Kahro, Tauno; Rajeswary, Aravind Simon John Francis; Kumar, Ravi; Kukli, Kaupo; Tamm, Aile; Rosen, Joseph; Anand, Vijayakumar
Enhanced design of pure phase greyscale diffractive optical elements by phase-retrieval-assisted multiplexing of complex functions
(Society of Photo-Optical Instrumentation Engineers (SPIE), 2023) Gopinath, Shivasubramanian; Bleahu, Andrei; Kahro, Tauno; Rajeswary, Aravind Simon John Francis; Kumar, Ravi
Extending the Depth of Focus of Infrared Microscope Using a Binary Axicon Fabricated on Barium Fluoride
(2024) Han, Molong; Smith, Daniel; Kahro, Tauno; Stonytė, Dominyka; Kasikov, Aarne; Gailevičius, Darius; Tiwari, Vipin; Xavier, Agnes Pristy Ignatius; Gopinath, Shivasubramanian; Ng, Soon Hock; Rajeswary, Aravind Simon John Francis; Tamm, Aile; Kukli, Kaupo
Axial resolution is one of the most important characteristics of a microscope. In all microscopes, a high axial resolution is desired in order to discriminate information efficiently along the longitudinal direction. However, when studying thick samples that do not contain laterally overlapping information, a low axial resolution is desirable, as information from multiple planes can be recorded simultaneously from a single camera shot instead of plane-by-plane mechanical refocusing. In this study, we increased the focal depth of an infrared microscope non-invasively by introducing a binary axicon fabricated on a barium fluoride substrate close to the sample. Preliminary results of imaging the thick and sparse silk fibers showed an improved focal depth with a slight decrease in lateral resolution and an increase in background noise.
Extraordinary Computational Imaging Technologies with Ordinary Optical Modulators (Invited)
(2022) Anand, Vijayakumar; Ng, Soon Hock; Maksimovic, Jovan; Katkus, Tomas; Han, Molong; Linklater, Denver P.; Klein, Annaleise; Bambery, Keith R.; Tobin, Mark J.; Ivanova, Elena P.; Vongsvivut, Jitraporn; Juodkazis, Saulius
Computational imaging technology (CIT) has revolutionized the field of imaging. CITs based on two genres namely random and deterministic optical fields generated by common optical modulators with extraordinary imaging capabilities are discussed.
Faithful Transfer of 3D Propagation Characteristics of Deterministic and Random Optical Fields to Coded Aperture Imaging Systems Using Lucy-Richardson-Rosen Algorithm
(2023 International Conference on Next Generation Electronics (NEleX), 2023) Xavier, Agnes Pristy Ignatius; Arockiaraj, Francis Gracy; Gopinath, Shivasubramanian; Rajeswary, Aravind Simon John Francis; Reddy, Andra Naresh Kumar; Ganeev, Rashid A.; Singh, M. Scott Arockia; Tania, S.D. Milling; Anand, Vijayakumar
Engineering the complex amplitude and polarization of light is essential for various applications. In this direction, many deterministic and random optical beams such as Airy Bessel, and self-rotating beams were developed. While the above beams satisfied the requirements for the targeted applications, they are not suitable for imaging applications in spite of the valuable axial characteristics they possess, as they are not effective object-image mapping elements. Consequently, when exotic beams were implemented for direct imaging, only a distorted image was obtained. However, the scenario is different in coded aperture imaging (CAI) methods, where the imaging mode is indirect, consisting of optical recording and computational image recovery. Therefore, the point spread function (PSF) in CAI is not the recorded intensity distribution but the reconstructed intensity distribution. By employing a suitable computational reconstruction method, it is possible to convert the recorded intensity distribution into a Delta-like function. In this study, Lucy-Richardson-Rosen algorithm has been implemented as a generalized image recovery method for a wide range of optical beams, and the performance is validated in both simulation and optical experiments.
Fraxicon for Optical Applications with Aperture ∼1 mm: Characterisation Study
(2023) Mu, Haoran; Smith, Daniel; Ng, Soon Hock; Anand, Vijayakumar; Le, Nguyen Hoai An; Dharmavarapu, Raghu; Khajehsaeidimahabadi, Zahra; Richardson, Rachael T.; Ruther, Patrick; Stoddart, Paul R.; Gricius, Henrikas; Baravykas, Tomas; Gailevicius, Darius; Seniutinas, Gediminas; Katkus, Tomas; Juodkazis, Saulius
Emerging applications of optical technologies are driving the development of miniaturised light sources, which in turn require the fabrication of matching micro-optical elements with sub-1 mm cross-sections and high optical quality. This is particularly challenging for spatially constrained biomedical applications where reduced dimensionality is required, such as endoscopy, optogenetics, or optical implants. Planarisation of a lens by the Fresnel lens approach was adapted for a conical lens (axicon) and was made by direct femtosecond 780 nm/100 fs laser writing in the SZ2080™ polymer with a photo-initiator. Optical characterisation of the positive and negative fraxicons is presented. Numerical modelling of fraxicon optical performance under illumination by incoherent and spatially extended light sources is compared with the ideal case of plane-wave illumination. Considering the potential for rapid replication in soft polymers and resists, this approach holds great promise for the most demanding technological applications.
Fresnel Incoherent Correlation Holography using Lucy-Richardson-Rosen Algorithm
(Digital Holography and 3-D Imaging 2022, 2022) Balasubramani, Vinoth; Anand, Vijayakumar; Reddy, Andra Naresh Kumar; Rajeswary, Aravind Simon John Francis; Magistretti, Pierre J.; Depeursinge, Christian; Juodkazis, Saulius
Fresnel incoherent correlation holography (FINCH) is a super-resolution imaging method which requires at least three camera shots to image an object. In this study, we have demonstrated single-shot FINCH using a recently developed Lucy-Richardson-Rosen algorithm.
Fresnel incoherent correlation holography with Lucy-Richardson-Rosen algorithm and modified Gerchberg-Saxton algorithm
(2023) Anand, Vijayakumar; Juodkazis, Saulius; Rajeswary, Aravind Simon John Francis; Arockiaraj, Francis Gracy; Gopinath, Shivasubramanian; Bleahu, Andrei
Fresnel incoherent correlation holography with Lucy-Richardson-Rosen algorithm and modified Gerchberg-Saxton algorithm
(Society of Photo-Optical Instrumentation Engineers (SPIE), 2023) Bleahu, Andrei; Gopinath, Shivasubramanian; Arockiaraj, Francis Gracy; Rajeswary, Aravind Simon John Francis; Juodkazis, Saulius

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